Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Zfp640-202ENSMUST00000224116 1562 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm15054-201ENSMUST00000117393 281 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm14365-201ENSMUST00000117535 587 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm11260-201ENSMUST00000121163 942 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm23754-201ENSMUST00000157576 63 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm29545-201ENSMUST00000188878 694 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm29435-201ENSMUST00000191310 689 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm17953-201ENSMUST00000192061 667 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.16□□□□□ -1.42
Sf3b6P59708 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sf3b6P59708 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm43558-201ENSMUST00000200155 210 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm43368-201ENSMUST00000200638 409 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm44909-201ENSMUST00000208756 165 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm18860-201ENSMUST00000212029 764 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sf3b6P59708 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 CT030166.1-201ENSMUST00000222654 357 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
Sf3b6P59708 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.16□□□□□ -1.42
Sf3b6P59708 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.15□□□□□ -1.42
Sf3b6P59708 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.15□□□□□ -1.42
Sf3b6P59708 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sf3b6P59708 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.15□□□□□ -1.42
Sf3b6P59708 Mir760-201ENSMUST00000103257 119 ntBASIC6.15□□□□□ -1.42
Sf3b6P59708 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Sf3b6P59708 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sf3b6P59708 Gm16082-201ENSMUST00000115992 377 ntBASIC6.15□□□□□ -1.42
Sf3b6P59708 Gm12230-201ENSMUST00000118301 454 ntBASIC6.15□□□□□ -1.42
Sf3b6P59708 Gm4992-201ENSMUST00000120256 768 ntBASIC6.15□□□□□ -1.42
Sf3b6P59708 Gm15187-201ENSMUST00000122329 264 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms