Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxc11P31313 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm3544-201ENSMUST00000196129 305 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm20940-201ENSMUST00000197308 360 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxc11P31313 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Olfr519-201ENSMUST00000084752 960 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.08□□□□□ -1.44
Hoxc11P31313 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxc11P31313 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Hoxc11P31313 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hoxc11P31313 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxc11P31313 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm10936-201ENSMUST00000105264 252 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm11970-201ENSMUST00000116105 320 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm14513-201ENSMUST00000117403 123 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm12244-201ENSMUST00000119500 291 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm29747-201ENSMUST00000194764 585 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm18467-201ENSMUST00000208805 434 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm9321-201ENSMUST00000221179 778 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hoxc11P31313 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.07□□□□□ -1.44
Hoxc11P31313 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Hoxc11P31313 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxc11P31313 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Hoxc11P31313 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxc11P31313 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Hoxc11P31313 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.06□□□□□ -1.44
Hoxc11P31313 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxc11P31313 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxc11P31313 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxc11P31313 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxc11P31313 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxc11P31313 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Hoxc11P31313 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxc11P31313 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.06□□□□□ -1.44
Hoxc11P31313 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.06□□□□□ -1.44
Hoxc11P31313 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm24434-201ENSMUST00000104081 132 ntBASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm22371-201ENSMUST00000104588 130 ntBASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm12890-201ENSMUST00000120885 373 ntBASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm26023-201ENSMUST00000122722 313 ntBASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.06□□□□□ -1.44
Hoxc11P31313 Gm27512-201ENSMUST00000175328 126 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms