Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC122937.2-201ENSMUST00000228258 1051 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm24029-201ENSMUST00000083928 143 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.71□□□□□ -1.5
Lsm1Q8VC85 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.71□□□□□ -1.5
Lsm1Q8VC85 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm12439-201ENSMUST00000117162 365 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm13998-201ENSMUST00000120952 335 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm14747-201ENSMUST00000149888 984 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm4152-201ENSMUST00000172675 259 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm37196-201ENSMUST00000194762 906 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm37883-201ENSMUST00000194970 725 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm43779-201ENSMUST00000196691 829 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm18405-201ENSMUST00000220743 511 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm23686-201ENSMUST00000083241 164 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.7□□□□□ -1.5
Lsm1Q8VC85 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm16007-201ENSMUST00000117837 286 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm13176-201ENSMUST00000117910 477 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm12262-201ENSMUST00000119915 305 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm11609-201ENSMUST00000121926 793 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm12504-202ENSMUST00000148026 306 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm25989-201ENSMUST00000158761 133 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm6264-201ENSMUST00000160802 624 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm20453-201ENSMUST00000173968 226 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm38237-201ENSMUST00000193366 376 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm7492-201ENSMUST00000201745 725 ntBASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.69□□□□□ -1.5
Lsm1Q8VC85 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms