Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm44604-201ENSMUST00000205475 496 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm44837-201ENSMUST00000206863 717 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm4032-201ENSMUST00000210886 487 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm46369-201ENSMUST00000221577 401 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm6541-201ENSMUST00000165542 561 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm9671-201ENSMUST00000171502 547 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Mir6362-201ENSMUST00000184329 107 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm18728-201ENSMUST00000186155 753 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm44683-201ENSMUST00000209088 484 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a6Q8C6K9 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm13493-201ENSMUST00000120318 493 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm8032-201ENSMUST00000171009 574 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm27679-201ENSMUST00000184612 84 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm37838-201ENSMUST00000194464 312 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Thoc7-209ENSMUST00000225325 765 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm13681-201ENSMUST00000117925 210 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm25383-201ENSMUST00000157810 144 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm43744-201ENSMUST00000196387 688 ntBASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a6Q8C6K9 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms