Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm5244-202ENSMUST00000189517 743 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm29551-201ENSMUST00000190913 698 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm43744-201ENSMUST00000196387 688 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm42652-201ENSMUST00000199073 614 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm8930-201ENSMUST00000201693 768 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm4012-201ENSMUST00000221504 581 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm13811-201ENSMUST00000117800 256 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm15233-201ENSMUST00000118747 400 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm13338-201ENSMUST00000120235 361 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm12482-201ENSMUST00000120435 630 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm8545-201ENSMUST00000120692 801 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm12494-201ENSMUST00000121684 521 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm25439-201ENSMUST00000158280 131 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm3008-201ENSMUST00000160566 571 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm24303-201ENSMUST00000178237 126 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm28640-201ENSMUST00000190918 550 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm19739-201ENSMUST00000195941 153 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm45185-201ENSMUST00000207556 404 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm4032-201ENSMUST00000210886 487 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm18996-201ENSMUST00000214851 755 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm6477-201ENSMUST00000217098 764 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm18413-201ENSMUST00000221573 655 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm23502-201ENSMUST00000083902 145 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nkx3-1P97436 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.2□□□□□ -1.58
Nkx3-1P97436 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.19□□□□□ -1.58
Nkx3-1P97436 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx3-1P97436 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms