Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm10557-201ENSMUST00000097690 750 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Smok4a-202ENSMUST00000144015 2317 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm6480-201ENSMUST00000121552 1886 ntBASIC8.95□□□□□ -0.98
Trim35Q8C006 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim35Q8C006 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Hrh1-204ENSMUST00000161220 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim35Q8C006 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Ptafr-201ENSMUST00000070690 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm42966-201ENSMUST00000197883 1691 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Nedd4l-204ENSMUST00000224347 3150 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trim35Q8C006 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm37549-201ENSMUST00000194096 4065 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Arhgef15-201ENSMUST00000065040 4123 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Foxn3-202ENSMUST00000085108 2611 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm7340-201ENSMUST00000119729 2752 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 AC153955.4-201ENSMUST00000217069 2752 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Dync2h1-202ENSMUST00000139115 2892 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Cox20-ps-201ENSMUST00000119872 353 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm12431-201ENSMUST00000120693 168 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Snora81-201ENSMUST00000157310 178 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Ly6g6e-202ENSMUST00000172494 464 ntTSL 3 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm20523-201ENSMUST00000174340 1124 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm22716-201ENSMUST00000177596 107 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm25020-201ENSMUST00000178071 107 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm25942-201ENSMUST00000180080 110 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm27985-201ENSMUST00000185112 378 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm8307-201ENSMUST00000187682 1150 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm28865-201ENSMUST00000187685 723 ntTSL 3 BASIC8.94□□□□□ -0.98
Trim35Q8C006 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm37338-201ENSMUST00000191986 127 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Ighv1-33-201ENSMUST00000193220 350 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm5842-201ENSMUST00000195073 622 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm42522-201ENSMUST00000196071 255 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Igkv4-75-201ENSMUST00000197204 359 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm18341-201ENSMUST00000197538 622 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm42821-201ENSMUST00000199771 489 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm5737-201ENSMUST00000208668 1272 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 AC112680.2-201ENSMUST00000213119 595 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 AC153562.1-201ENSMUST00000215390 394 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 AC122251.1-201ENSMUST00000227717 639 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm22740-201ENSMUST00000083439 109 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Olfr1425-201ENSMUST00000087828 939 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm37717-201ENSMUST00000192647 3027 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Rrm2-201ENSMUST00000020980 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Vmn2r-ps53-201ENSMUST00000173045 2353 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Ttc5-202ENSMUST00000226768 2366 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Hsp90ab1-201ENSMUST00000024739 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Snx32-201ENSMUST00000070172 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim35Q8C006 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Gm5997-201ENSMUST00000208154 1864 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.94□□□□□ -0.98
Trim35Q8C006 Sept2-214ENSMUST00000172165 3192 ntTSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trim35Q8C006 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 AC153526.2-201ENSMUST00000218206 2031 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm37091-201ENSMUST00000195455 2087 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm37366-201ENSMUST00000194487 2297 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Synj2-205ENSMUST00000115786 2531 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 AC144772.2-201ENSMUST00000228830 2859 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim35Q8C006 Mir449c-201ENSMUST00000102192 109 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm22707-201ENSMUST00000103834 110 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC8.93□□□□□ -0.98
Trim35Q8C006 Gm13007-201ENSMUST00000121866 365 ntBASIC8.93□□□□□ -0.98
Trim35Q8C006 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms