Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm12874-201ENSMUST00000117190 913 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm8501-201ENSMUST00000117684 432 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm14220-201ENSMUST00000118114 449 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm12650-201ENSMUST00000121966 258 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm14970-201ENSMUST00000122289 355 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm11233-201ENSMUST00000122357 634 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm26372-201ENSMUST00000157831 236 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Mir3110-201ENSMUST00000175053 80 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm4617-201ENSMUST00000178993 331 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm38268-201ENSMUST00000195813 193 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm43765-201ENSMUST00000196303 893 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Mir219c-201ENSMUST00000199860 60 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 AC138284.5-201ENSMUST00000214389 652 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 AC166358.3-201ENSMUST00000221456 181 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 AC125543.4-201ENSMUST00000223385 117 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 AC154767.2-201ENSMUST00000224584 414 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 CT030645.3-201ENSMUST00000225483 1022 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 n-R5s204-201ENSMUST00000082972 119 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm43900-201ENSMUST00000204868 2669 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Mir449c-201ENSMUST00000102192 109 ntBASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Gm26474-201ENSMUST00000116762 122 ntBASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Gm14836-201ENSMUST00000118567 471 ntBASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Gm11349-201ENSMUST00000122209 1116 ntBASIC7.07□□□□□ -1.28
Ddx55Q6ZPL9 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms