Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.48□□□□□ -1.37
NcanP55066 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Gm12308-201ENSMUST00000120440 389 ntBASIC6.48□□□□□ -1.37
NcanP55066 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.48□□□□□ -1.37
NcanP55066 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.48□□□□□ -1.37
NcanP55066 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.48□□□□□ -1.37
NcanP55066 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.48□□□□□ -1.37
NcanP55066 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.48□□□□□ -1.37
NcanP55066 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NcanP55066 Gm37710-201ENSMUST00000193501 1274 ntBASIC6.48□□□□□ -1.37
NcanP55066 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Gm18904-201ENSMUST00000218756 329 ntBASIC6.48□□□□□ -1.37
NcanP55066 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.48□□□□□ -1.37
NcanP55066 Gm5080-201ENSMUST00000220341 743 ntBASIC6.48□□□□□ -1.37
NcanP55066 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.48□□□□□ -1.37
NcanP55066 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NcanP55066 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NcanP55066 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
NcanP55066 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NcanP55066 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.48□□□□□ -1.37
NcanP55066 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.48□□□□□ -1.37
NcanP55066 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.48□□□□□ -1.37
NcanP55066 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
NcanP55066 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.47□□□□□ -1.37
NcanP55066 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NcanP55066 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NcanP55066 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Gm13567-201ENSMUST00000118026 247 ntBASIC6.47□□□□□ -1.37
NcanP55066 Gm14842-201ENSMUST00000119577 269 ntBASIC6.47□□□□□ -1.37
NcanP55066 Gm23171-201ENSMUST00000157159 264 ntBASIC6.47□□□□□ -1.37
NcanP55066 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
NcanP55066 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Gm29284-201ENSMUST00000188363 255 ntBASIC6.47□□□□□ -1.37
NcanP55066 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.47□□□□□ -1.37
NcanP55066 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.47□□□□□ -1.37
NcanP55066 Gm8454-201ENSMUST00000196980 811 ntBASIC6.47□□□□□ -1.37
NcanP55066 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.47□□□□□ -1.37
NcanP55066 Gm4290-201ENSMUST00000206897 814 ntBASIC6.47□□□□□ -1.37
NcanP55066 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.47□□□□□ -1.37
NcanP55066 Gm2059-201ENSMUST00000212025 287 ntBASIC6.47□□□□□ -1.37
NcanP55066 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.47□□□□□ -1.37
NcanP55066 Gm7557-201ENSMUST00000221935 865 ntBASIC6.47□□□□□ -1.37
NcanP55066 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.47□□□□□ -1.37
NcanP55066 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NcanP55066 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Gm22053-201ENSMUST00000083394 200 ntBASIC6.47□□□□□ -1.37
NcanP55066 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.47□□□□□ -1.37
NcanP55066 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.47□□□□□ -1.37
NcanP55066 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NcanP55066 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms