Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm24525-201ENSMUST00000082917 151 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gm25682-201ENSMUST00000083942 164 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Cdx2P43241 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.75□□□□□ -1.49
Cdx2P43241 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx2P43241 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdx2P43241 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx2P43241 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Cdx2P43241 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Gm5387-201ENSMUST00000119776 857 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Gm11804-201ENSMUST00000121663 468 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm22235-201ENSMUST00000157085 110 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Mir1970-201ENSMUST00000157839 104 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Gm8604-201ENSMUST00000183150 965 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.74□□□□□ -1.49
Cdx2P43241 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm8920-201ENSMUST00000196153 924 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Gm5418-201ENSMUST00000206932 528 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Gm18705-201ENSMUST00000215985 913 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Gm18628-201ENSMUST00000220584 475 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm5229-201ENSMUST00000039375 354 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx2P43241 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx2P43241 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx2P43241 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx2P43241 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Cdx2P43241 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.74□□□□□ -1.49
Cdx2P43241 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx2P43241 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cdx2P43241 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cdx2P43241 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdx2P43241 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Cdx2P43241 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Gm13740-201ENSMUST00000120590 310 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm6067-201ENSMUST00000121648 491 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm22106-201ENSMUST00000122544 127 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx2P43241 Gm14349-201ENSMUST00000137155 902 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdx2P43241 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC5.73□□□□□ -1.49
Cdx2P43241 Gm25824-201ENSMUST00000157092 121 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms