Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col2a1P28481 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Col2a1P28481 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.71□□□□□ -1.33
Col2a1P28481 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col2a1P28481 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.71□□□□□ -1.33
Col2a1P28481 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Col2a1P28481 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.71□□□□□ -1.34
Col2a1P28481 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col2a1P28481 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col2a1P28481 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col2a1P28481 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col2a1P28481 Gm13333-201ENSMUST00000119424 781 ntBASIC6.71□□□□□ -1.34
Col2a1P28481 Gm14521-201ENSMUST00000119545 350 ntBASIC6.71□□□□□ -1.34
Col2a1P28481 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 Gm25824-201ENSMUST00000157092 121 ntBASIC6.71□□□□□ -1.34
Col2a1P28481 Gm28507-201ENSMUST00000189737 703 ntBASIC6.71□□□□□ -1.34
Col2a1P28481 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.71□□□□□ -1.34
Col2a1P28481 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.71□□□□□ -1.34
Col2a1P28481 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.71□□□□□ -1.34
Col2a1P28481 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.71□□□□□ -1.34
Col2a1P28481 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.71□□□□□ -1.34
Col2a1P28481 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col2a1P28481 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.71□□□□□ -1.34
Col2a1P28481 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.71□□□□□ -1.34
Col2a1P28481 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.71□□□□□ -1.34
Col2a1P28481 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.71□□□□□ -1.34
Col2a1P28481 Gm36501-201ENSMUST00000221857 745 ntBASIC6.71□□□□□ -1.34
Col2a1P28481 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col2a1P28481 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col2a1P28481 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col2a1P28481 Gm14998-201ENSMUST00000120502 495 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Scarna6-201ENSMUST00000158656 265 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Gm26738-201ENSMUST00000181312 601 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Gm27855-201ENSMUST00000184122 128 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Gm28188-201ENSMUST00000190483 236 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Gm37070-201ENSMUST00000193272 460 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Gm42522-201ENSMUST00000196071 255 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Gm31306-201ENSMUST00000197517 508 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Gm23795-201ENSMUST00000084006 137 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col2a1P28481 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.7□□□□□ -1.34
Col2a1P28481 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col2a1P28481 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.7□□□□□ -1.34
Col2a1P28481 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col2a1P28481 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm44439-201ENSMUST00000203379 3592 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col2a1P28481 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.69□□□□□ -1.34
Col2a1P28481 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.69□□□□□ -1.34
Col2a1P28481 Gm23774-201ENSMUST00000158990 131 ntBASIC6.69□□□□□ -1.34
Col2a1P28481 Gm22993-201ENSMUST00000175423 254 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms