Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm38164-201ENSMUST00000192810 330 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm44053-201ENSMUST00000203364 929 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 AC069561.1-201ENSMUST00000213750 424 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Sdc1P18828 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm18586-201ENSMUST00000217265 518 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm26226-201ENSMUST00000082509 116 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sdc1P18828 Gm38142-201ENSMUST00000194093 3555 ntBASIC4.78□□□□□ -1.64
Sdc1P18828 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sdc1P18828 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sdc1P18828 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sdc1P18828 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.65
Sdc1P18828 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sdc1P18828 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sdc1P18828 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sdc1P18828 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sdc1P18828 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sdc1P18828 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sdc1P18828 Mir503-201ENSMUST00000102168 71 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm22499-201ENSMUST00000104501 135 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm13455-201ENSMUST00000118767 517 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm4992-201ENSMUST00000120256 768 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm11200-201ENSMUST00000121698 448 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm6541-201ENSMUST00000165542 561 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sdc1P18828 Mir6922-201ENSMUST00000185099 66 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm2566-201ENSMUST00000201267 431 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm42887-201ENSMUST00000202469 1119 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm18689-201ENSMUST00000203969 902 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm45870-201ENSMUST00000211269 601 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 AC153847.1-201ENSMUST00000214524 353 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 AC129323.1-201ENSMUST00000216733 470 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 AC073562.1-201ENSMUST00000222117 401 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm8288-201ENSMUST00000223406 593 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sdc1P18828 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm26442-201ENSMUST00000082588 153 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm24046-201ENSMUST00000083111 165 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm29761-201ENSMUST00000215964 1939 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sdc1P18828 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sdc1P18828 Gm44102-201ENSMUST00000204031 1666 ntBASIC4.77□□□□□ -1.65
Sdc1P18828 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Sdc1P18828 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.76□□□□□ -1.65
Sdc1P18828 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Sdc1P18828 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms