Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm44104-201ENSMUST00000204736 3777 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm25848-201ENSMUST00000116790 144 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm12044-201ENSMUST00000120335 213 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm12103-201ENSMUST00000121892 362 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm7346-201ENSMUST00000169661 476 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm27601-201ENSMUST00000184794 127 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm28191-201ENSMUST00000189112 211 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm43141-201ENSMUST00000199695 274 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm43367-201ENSMUST00000199986 625 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm43850-201ENSMUST00000202021 578 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm43973-201ENSMUST00000203562 210 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm44571-201ENSMUST00000208092 533 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 AC126275.1-201ENSMUST00000224881 446 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 AC121960.3-201ENSMUST00000227077 623 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 AW822073-201ENSMUST00000075305 555 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Gm37311-201ENSMUST00000195541 2024 ntBASIC7.44□□□□□ -1.22
Clp1Q99LI9 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clp1Q99LI9 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Mir760-201ENSMUST00000103257 119 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm24790-201ENSMUST00000104285 132 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm14513-201ENSMUST00000117403 123 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm14365-201ENSMUST00000117535 587 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm15094-201ENSMUST00000118394 1131 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Mir1932-201ENSMUST00000157390 90 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm22390-201ENSMUST00000157588 325 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm29259-201ENSMUST00000186396 694 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm37219-201ENSMUST00000192036 926 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.43□□□□□ -1.22
Clp1Q99LI9 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Clp1Q99LI9 Gm4556-201ENSMUST00000217808 355 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms