Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.12□□□□□ -1.43
Cstf1Q99LC2 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cstf1Q99LC2 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.12□□□□□ -1.43
Cstf1Q99LC2 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cstf1Q99LC2 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cstf1Q99LC2 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cstf1Q99LC2 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm14356-201ENSMUST00000118322 869 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm11737-201ENSMUST00000118713 468 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm13818-201ENSMUST00000119441 511 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm23280-201ENSMUST00000157905 139 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm7335-201ENSMUST00000172475 373 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Mirt2-201ENSMUST00000175179 285 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm3841-201ENSMUST00000191399 451 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm44330-201ENSMUST00000200106 143 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm19060-201ENSMUST00000201959 421 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm6474-201ENSMUST00000223250 699 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm25682-201ENSMUST00000083942 164 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cstf1Q99LC2 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Thap6-201ENSMUST00000191860 3151 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm22592-201ENSMUST00000104242 131 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm13887-201ENSMUST00000119009 344 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm14331-201ENSMUST00000120396 409 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm26372-201ENSMUST00000157831 236 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm6061-201ENSMUST00000175860 492 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Mir6367-201ENSMUST00000183385 102 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm27158-201ENSMUST00000183813 238 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm43084-201ENSMUST00000200696 947 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm7832-201ENSMUST00000202613 880 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm45777-201ENSMUST00000213009 301 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.1□□□□□ -1.43
Cstf1Q99LC2 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms