Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Sox1P53783 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm14589-201ENSMUST00000121640 727 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm16027-201ENSMUST00000161618 758 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm2855-201ENSMUST00000166765 456 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm25675-201ENSMUST00000174979 118 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sox1P53783 Gm26509-201ENSMUST00000180947 948 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Gm28266-201ENSMUST00000191410 439 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm38022-201ENSMUST00000191762 403 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm38131-201ENSMUST00000192449 430 ntBASIC7.13□□□□□ -1.27
Sox1P53783 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm37288-201ENSMUST00000193963 334 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm5288-201ENSMUST00000198323 1119 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm5154-201ENSMUST00000203971 399 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm44566-201ENSMUST00000207638 304 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm9375-201ENSMUST00000208899 903 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Sox1P53783 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Gm34424-201ENSMUST00000213400 782 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.13□□□□□ -1.27
Sox1P53783 AC102369.1-201ENSMUST00000218415 373 ntBASIC7.13□□□□□ -1.27
Sox1P53783 AC110381.1-201ENSMUST00000218987 586 ntBASIC7.13□□□□□ -1.27
Sox1P53783 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Gm18405-201ENSMUST00000220743 511 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm3785-201ENSMUST00000221000 202 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm30738-201ENSMUST00000221346 502 ntBASIC7.13□□□□□ -1.27
Sox1P53783 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sox1P53783 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sox1P53783 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.12□□□□□ -1.27
Sox1P53783 AC158981.2-201ENSMUST00000227565 1537 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Sox1P53783 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.12□□□□□ -1.27
Sox1P53783 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.12□□□□□ -1.27
Sox1P53783 Gm15203-201ENSMUST00000117668 455 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm14733-201ENSMUST00000117680 133 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm12770-201ENSMUST00000121734 462 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Mir1898-201ENSMUST00000122643 83 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm16276-201ENSMUST00000131218 262 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox1P53783 Gm24733-201ENSMUST00000158863 253 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Sox1P53783 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox1P53783 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC7.12□□□□□ -1.27
Sox1P53783 Mir3062-201ENSMUST00000174986 105 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm24080-201ENSMUST00000175178 232 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Mir1264-201ENSMUST00000175381 86 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm19560-201ENSMUST00000177510 514 ntBASIC7.12□□□□□ -1.27
Sox1P53783 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.12□□□□□ -1.27
Sox1P53783 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox1P53783 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC7.12□□□□□ -1.27
Sox1P53783 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox1P53783 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.12□□□□□ -1.27
Sox1P53783 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC7.12□□□□□ -1.27
Sox1P53783 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Sox1P53783 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms