Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Sox18P43680 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Sox18P43680 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sox18P43680 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox18P43680 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox18P43680 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Sox18P43680 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Sox18P43680 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox18P43680 Gm12183-201ENSMUST00000120566 1848 ntBASIC7.41□□□□□ -1.22
Sox18P43680 Gm37780-201ENSMUST00000194117 1873 ntBASIC7.41□□□□□ -1.22
Sox18P43680 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC7.41□□□□□ -1.22
Sox18P43680 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Sox18P43680 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC7.4□□□□□ -1.22
Sox18P43680 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.4□□□□□ -1.22
Sox18P43680 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Sox18P43680 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Sox18P43680 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm11348-201ENSMUST00000118813 318 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm12267-201ENSMUST00000121609 761 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm11759-201ENSMUST00000121742 464 ntBASIC7.4□□□□□ -1.22
Sox18P43680 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.4□□□□□ -1.22
Sox18P43680 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Gm26349-201ENSMUST00000157530 130 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm24729-201ENSMUST00000158225 137 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm22951-201ENSMUST00000179471 107 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Mir7082-201ENSMUST00000183526 92 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm27428-201ENSMUST00000184289 110 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Mir8120-201ENSMUST00000185035 139 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm20932-201ENSMUST00000189115 694 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm37841-201ENSMUST00000195367 376 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm43546-201ENSMUST00000196721 943 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm43669-201ENSMUST00000198229 436 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm42713-201ENSMUST00000202709 945 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm18423-201ENSMUST00000205144 1074 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm45136-201ENSMUST00000205793 943 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm44856-201ENSMUST00000206639 304 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm45232-201ENSMUST00000207811 162 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm39121-201ENSMUST00000208847 525 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Gm2436-201ENSMUST00000219562 774 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm40853-201ENSMUST00000221342 582 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Gm9255-201ENSMUST00000223225 581 ntBASIC7.4□□□□□ -1.22
Sox18P43680 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Sox18P43680 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Sox18P43680 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Sox18P43680 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Sox18P43680 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox18P43680 Gm18432-201ENSMUST00000195568 1451 ntBASIC7.4□□□□□ -1.22
Sox18P43680 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Sox18P43680 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Sox18P43680 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
Sox18P43680 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox18P43680 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox18P43680 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Sox18P43680 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox18P43680 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox18P43680 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.23
Sox18P43680 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox18P43680 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
Sox18P43680 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Sox18P43680 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Sox18P43680 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox18P43680 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox18P43680 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Sox18P43680 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Sox18P43680 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox18P43680 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox18P43680 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Sox18P43680 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox18P43680 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Sox18P43680 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms