Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm44374-201ENSMUST00000199821 140 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm43235-201ENSMUST00000200121 297 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm43224-201ENSMUST00000201567 898 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm43631-201ENSMUST00000202011 369 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm18995-201ENSMUST00000202981 520 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm44162-201ENSMUST00000203543 544 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm44971-201ENSMUST00000206192 337 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm45734-201ENSMUST00000211916 411 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC9.16□□□□□ -0.94
Clcn1Q64347 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC9.16□□□□□ -0.94
Clcn1Q64347 AC153153.2-201ENSMUST00000223572 411 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Clcn1Q64347 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Clcn1Q64347 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Clcn1Q64347 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Clcn1Q64347 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.16□□□□□ -0.94
Clcn1Q64347 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC9.16□□□□□ -0.94
Clcn1Q64347 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Clcn1Q64347 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Clcn1Q64347 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Clcn1Q64347 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm44101-201ENSMUST00000203951 2221 ntBASIC9.16□□□□□ -0.94
Clcn1Q64347 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Clcn1Q64347 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC9.16□□□□□ -0.94
Clcn1Q64347 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Clcn1Q64347 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Clcn1Q64347 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Clcn1Q64347 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Clcn1Q64347 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Clcn1Q64347 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm45528-201ENSMUST00000209854 3145 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Clcn1Q64347 AC115891.1-201ENSMUST00000215798 1755 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm11905-201ENSMUST00000117653 678 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm14600-201ENSMUST00000121032 630 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Mir1932-201ENSMUST00000157390 90 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm25556-201ENSMUST00000158077 144 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm26357-201ENSMUST00000158218 115 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm28542-201ENSMUST00000185545 696 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm18185-201ENSMUST00000186725 667 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm28185-201ENSMUST00000186815 694 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm29659-201ENSMUST00000187063 696 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm28682-201ENSMUST00000187430 696 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm28738-201ENSMUST00000187480 696 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm29319-201ENSMUST00000188060 696 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm29312-201ENSMUST00000188724 696 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm29637-201ENSMUST00000188877 696 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm29181-201ENSMUST00000191288 696 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm7351-201ENSMUST00000210745 580 ntBASIC9.15□□□□□ -0.94
Clcn1Q64347 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Clcn1Q64347 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Clcn1Q64347 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Clcn1Q64347 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Clcn1Q64347 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Clcn1Q64347 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC9.15□□□□□ -0.95
Clcn1Q64347 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.95
Clcn1Q64347 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Clcn1Q64347 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Clcn1Q64347 Klf5-202ENSMUST00000226784 2852 ntBASIC9.14□□□□□ -0.95
Clcn1Q64347 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Clcn1Q64347 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Clcn1Q64347 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC9.14□□□□□ -0.95
Clcn1Q64347 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.14□□□□□ -0.95
Clcn1Q64347 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC9.14□□□□□ -0.95
Clcn1Q64347 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Pramel-201ENSMUST00000118979 1383 ntBASIC9.14□□□□□ -0.95
Clcn1Q64347 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC9.14□□□□□ -0.95
Clcn1Q64347 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Gm45887-201ENSMUST00000212672 2998 ntBASIC9.14□□□□□ -0.95
Clcn1Q64347 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC9.14□□□□□ -0.95
Clcn1Q64347 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Clcn1Q64347 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Clcn1Q64347 Gm14293-201ENSMUST00000118528 577 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms