Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm13193-201ENSMUST00000117275 225 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm14106-201ENSMUST00000119382 438 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm8358-201ENSMUST00000167222 555 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm28507-201ENSMUST00000189737 703 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm28379-202ENSMUST00000187676 2896 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Mir708-201ENSMUST00000102189 109 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm25758-201ENSMUST00000103987 129 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm25415-201ENSMUST00000104220 132 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm15428-201ENSMUST00000121352 333 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm22235-201ENSMUST00000157085 110 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm24940-201ENSMUST00000158326 108 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm43743-202ENSMUST00000198353 491 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm37940-201ENSMUST00000194243 3251 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm44898-201ENSMUST00000205934 2223 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm22342-201ENSMUST00000122647 298 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm5139-201ENSMUST00000175943 249 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a6Q8C6K9 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm37367-201ENSMUST00000191771 2602 ntBASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm10764-202ENSMUST00000220397 2335 ntBASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 AC161884.1-201ENSMUST00000225436 2174 ntBASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm11318-201ENSMUST00000118640 961 ntBASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm12734-201ENSMUST00000120228 948 ntBASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm13007-201ENSMUST00000121866 365 ntBASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a6Q8C6K9 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms