Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 CT010470.1-201ENSMUST00000225364 1876 ntBASIC5.21□□□□□ -1.58
Rif1Q6PR54 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.21□□□□□ -1.58
Rif1Q6PR54 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.21□□□□□ -1.58
Rif1Q6PR54 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gm45782-201ENSMUST00000212670 366 ntBASIC5.21□□□□□ -1.58
Rif1Q6PR54 Gm10095-201ENSMUST00000222765 483 ntBASIC5.21□□□□□ -1.58
Rif1Q6PR54 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.21□□□□□ -1.58
Rif1Q6PR54 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm12074-201ENSMUST00000120189 219 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm26362-201ENSMUST00000158865 315 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm26318-201ENSMUST00000176507 96 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm38670-201ENSMUST00000199248 77 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm19900-201ENSMUST00000207285 576 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm18914-201ENSMUST00000214625 616 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm23502-201ENSMUST00000083902 145 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.2□□□□□ -1.58
Rif1Q6PR54 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rif1Q6PR54 Gm15901-201ENSMUST00000117663 941 ntBASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm15621-201ENSMUST00000119162 364 ntBASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm12237-201ENSMUST00000120158 470 ntBASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm13259-201ENSMUST00000120792 456 ntBASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm11990-201ENSMUST00000121505 897 ntBASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.19□□□□□ -1.58
Rif1Q6PR54 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.19□□□□□ -1.58
Rif1Q6PR54 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm44132-201ENSMUST00000205142 151 ntBASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm45473-201ENSMUST00000211452 616 ntBASIC5.19□□□□□ -1.58
Rif1Q6PR54 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms