Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim41Q5NCC3 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim41Q5NCC3 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim41Q5NCC3 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim41Q5NCC3 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm26967-201ENSMUST00000182878 2303 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm24789-201ENSMUST00000104282 131 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm13451-201ENSMUST00000117649 592 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm16057-201ENSMUST00000120811 759 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm14600-201ENSMUST00000121032 630 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm10913-201ENSMUST00000133732 463 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm7346-201ENSMUST00000169661 476 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Mir3078-201ENSMUST00000175231 87 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm28343-201ENSMUST00000185386 112 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm18699-201ENSMUST00000190713 243 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm37349-201ENSMUST00000194205 624 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 AC122844.1-201ENSMUST00000195971 107 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm43493-201ENSMUST00000199837 202 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm7499-201ENSMUST00000210423 813 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Ap3m1-208ENSMUST00000224016 764 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Olfr519-201ENSMUST00000084752 960 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm45174-201ENSMUST00000208884 3065 ntBASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim41Q5NCC3 Gm42636-201ENSMUST00000197174 2239 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm22771-201ENSMUST00000104449 91 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm15175-201ENSMUST00000117629 132 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm14893-201ENSMUST00000117904 282 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm11987-201ENSMUST00000118524 381 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm6591-201ENSMUST00000121063 434 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm11257-201ENSMUST00000121313 315 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm19200-201ENSMUST00000182579 1001 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm21392-201ENSMUST00000182950 972 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm28952-201ENSMUST00000189285 681 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm29525-201ENSMUST00000189844 699 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm29523-201ENSMUST00000191415 699 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm37295-201ENSMUST00000192186 109 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 AC109212.1-201ENSMUST00000215561 427 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Olfr809-203ENSMUST00000218237 1100 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm4012-201ENSMUST00000221504 581 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gm43254-201ENSMUST00000199187 2491 ntBASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim41Q5NCC3 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm11343-201ENSMUST00000120579 599 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm16412-201ENSMUST00000121602 273 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm11692-201ENSMUST00000122121 902 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm10177-202ENSMUST00000161698 207 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm25397-201ENSMUST00000176951 92 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm9892-201ENSMUST00000182415 992 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Gm37209-201ENSMUST00000194109 1276 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 Mir6375-201ENSMUST00000197176 95 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim41Q5NCC3 AC155929.1-201ENSMUST00000220217 1276 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 AC124489.2-201ENSMUST00000223930 589 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 AC158521.1-202ENSMUST00000224352 645 ntBASIC12.53□□□□□ -0.4
Trim41Q5NCC3 AC167140.1-201ENSMUST00000224710 403 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms