Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm44316-201ENSMUST00000199274 97 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.4□□□□□ -1.39
Upf3bQ3ULL6 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Upf3bQ3ULL6 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Upf3bQ3ULL6 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.4□□□□□ -1.39
Upf3bQ3ULL6 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Upf3bQ3ULL6 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.4□□□□□ -1.39
Upf3bQ3ULL6 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.4□□□□□ -1.39
Upf3bQ3ULL6 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Upf3bQ3ULL6 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Upf3bQ3ULL6 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm13770-201ENSMUST00000117149 305 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm11902-201ENSMUST00000118849 270 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm24179-201ENSMUST00000158925 127 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm17121-201ENSMUST00000170414 847 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm17222-201ENSMUST00000180135 847 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm26595-201ENSMUST00000181585 484 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm412-201ENSMUST00000193360 948 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm18467-201ENSMUST00000208805 434 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.39□□□□□ -1.39
Upf3bQ3ULL6 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Mir449c-201ENSMUST00000102192 109 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm23440-201ENSMUST00000104299 130 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm25345-201ENSMUST00000104505 133 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm4914-201ENSMUST00000119757 459 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm12833-201ENSMUST00000136112 477 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm16164-201ENSMUST00000160078 468 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm9671-201ENSMUST00000171502 547 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm7952-201ENSMUST00000180540 984 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm43392-201ENSMUST00000196560 434 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm5990-201ENSMUST00000203126 746 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Upf3bQ3ULL6 Olfr519-201ENSMUST00000084752 960 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms