Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm23626-201ENSMUST00000082458 133 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 n-R5s13-201ENSMUST00000093707 119 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Col17a1Q07563 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm17101-201ENSMUST00000169520 1588 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Col17a1Q07563 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm43162-201ENSMUST00000198292 1770 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC9.38□□□□□ -0.91
Col17a1Q07563 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Col17a1Q07563 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Col17a1Q07563 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Gm15670-201ENSMUST00000117740 447 ntBASIC9.37□□□□□ -0.91
Col17a1Q07563 Gm11825-201ENSMUST00000120710 736 ntBASIC9.37□□□□□ -0.91
Col17a1Q07563 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Col17a1Q07563 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC9.37□□□□□ -0.91
Col17a1Q07563 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC9.37□□□□□ -0.91
Col17a1Q07563 AC173345.3-201ENSMUST00000221245 1093 ntBASIC9.37□□□□□ -0.91
Col17a1Q07563 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC9.37□□□□□ -0.91
Col17a1Q07563 AC158954.1-201ENSMUST00000228272 1006 ntBASIC9.37□□□□□ -0.91
Col17a1Q07563 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Gm18632-201ENSMUST00000222597 2087 ntBASIC9.37□□□□□ -0.91
Col17a1Q07563 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Col17a1Q07563 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Col17a1Q07563 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC9.37□□□□□ -0.91
Col17a1Q07563 Gm43873-201ENSMUST00000204505 3938 ntBASIC9.37□□□□□ -0.91
Col17a1Q07563 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Col17a1Q07563 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col17a1Q07563 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Col17a1Q07563 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
Col17a1Q07563 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC9.36□□□□□ -0.91
Col17a1Q07563 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Col17a1Q07563 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Gm23276-201ENSMUST00000157913 138 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Gm8506-201ENSMUST00000186661 829 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 Gm37689-201ENSMUST00000193139 275 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 Gm18150-201ENSMUST00000195341 645 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 AC154527.1-201ENSMUST00000225809 242 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 CT025525.2-201ENSMUST00000227743 423 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Col17a1Q07563 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Col17a1Q07563 AC153729.1-201ENSMUST00000214055 2562 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Gm37420-201ENSMUST00000195332 2912 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 Gm43728-201ENSMUST00000198817 2622 ntBASIC9.36□□□□□ -0.91
Col17a1Q07563 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col17a1Q07563 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm38325-201ENSMUST00000194507 1377 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm14098-201ENSMUST00000119295 623 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm15741-201ENSMUST00000119401 754 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm11677-201ENSMUST00000121349 977 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm29288-201ENSMUST00000191582 901 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm38018-201ENSMUST00000195651 540 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm18702-201ENSMUST00000196923 588 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm19540-201ENSMUST00000221843 810 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm5702-201ENSMUST00000185629 2469 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm43328-201ENSMUST00000198544 1434 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms