Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.54□□□□□ -1.36
NcanP55066 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.54□□□□□ -1.36
NcanP55066 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
NcanP55066 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.53□□□□□ -1.36
NcanP55066 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.53□□□□□ -1.36
NcanP55066 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.53□□□□□ -1.36
NcanP55066 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.53□□□□□ -1.36
NcanP55066 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.53□□□□□ -1.36
NcanP55066 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.53□□□□□ -1.36
NcanP55066 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NcanP55066 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.53□□□□□ -1.36
NcanP55066 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.53□□□□□ -1.36
NcanP55066 Gm12110-201ENSMUST00000121601 579 ntBASIC6.53□□□□□ -1.36
NcanP55066 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Gm11545-201ENSMUST00000146507 375 ntBASIC6.53□□□□□ -1.36
NcanP55066 Gm22094-201ENSMUST00000158976 117 ntBASIC6.53□□□□□ -1.36
NcanP55066 Gm24081-201ENSMUST00000175177 125 ntBASIC6.53□□□□□ -1.36
NcanP55066 Gm21399-201ENSMUST00000180210 597 ntBASIC6.53□□□□□ -1.36
NcanP55066 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.53□□□□□ -1.36
NcanP55066 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC6.53□□□□□ -1.36
NcanP55066 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Gm3841-201ENSMUST00000191399 451 ntBASIC6.53□□□□□ -1.36
NcanP55066 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.53□□□□□ -1.36
NcanP55066 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.53□□□□□ -1.36
NcanP55066 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC6.53□□□□□ -1.36
NcanP55066 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.53□□□□□ -1.36
NcanP55066 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.53□□□□□ -1.36
NcanP55066 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NcanP55066 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NcanP55066 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.53□□□□□ -1.36
NcanP55066 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NcanP55066 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
NcanP55066 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.53□□□□□ -1.36
NcanP55066 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NcanP55066 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.53□□□□□ -1.36
NcanP55066 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.53□□□□□ -1.36
NcanP55066 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.52□□□□□ -1.36
NcanP55066 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
NcanP55066 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
NcanP55066 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.52□□□□□ -1.37
NcanP55066 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.52□□□□□ -1.37
NcanP55066 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.52□□□□□ -1.37
NcanP55066 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NcanP55066 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.52□□□□□ -1.37
NcanP55066 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.52□□□□□ -1.37
NcanP55066 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Mir7047-201ENSMUST00000184595 64 ntBASIC6.52□□□□□ -1.37
NcanP55066 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.52□□□□□ -1.37
NcanP55066 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Gm42522-201ENSMUST00000196071 255 ntBASIC6.52□□□□□ -1.37
NcanP55066 Gm45596-201ENSMUST00000209279 434 ntBASIC6.52□□□□□ -1.37
NcanP55066 AC159246.1-201ENSMUST00000214478 249 ntBASIC6.52□□□□□ -1.37
NcanP55066 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.52□□□□□ -1.37
NcanP55066 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.52□□□□□ -1.37
NcanP55066 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NcanP55066 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC6.52□□□□□ -1.37
NcanP55066 Gm24200-201ENSMUST00000082955 157 ntBASIC6.52□□□□□ -1.37
NcanP55066 Gm23502-201ENSMUST00000083902 145 ntBASIC6.52□□□□□ -1.37
NcanP55066 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC6.52□□□□□ -1.37
NcanP55066 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NcanP55066 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.52□□□□□ -1.37
NcanP55066 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.52□□□□□ -1.37
NcanP55066 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.52□□□□□ -1.37
NcanP55066 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.52□□□□□ -1.37
NcanP55066 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NcanP55066 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NcanP55066 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.52□□□□□ -1.37
NcanP55066 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NcanP55066 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
NcanP55066 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 246.9 ms