Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Tnfsf4P43488 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.66□□□□□ -1.5
Tnfsf4P43488 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Tnfsf4P43488 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC5.66□□□□□ -1.5
Tnfsf4P43488 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.66□□□□□ -1.5
Tnfsf4P43488 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.66□□□□□ -1.5
Tnfsf4P43488 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Tnfsf4P43488 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.66□□□□□ -1.5
Tnfsf4P43488 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Tnfsf4P43488 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm13702-201ENSMUST00000118542 825 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Mir1953-201ENSMUST00000157866 89 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm24363-201ENSMUST00000158440 311 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm21048-201ENSMUST00000202470 1166 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm19764-201ENSMUST00000203630 649 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Tnfsf4P43488 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.65□□□□□ -1.5
Tnfsf4P43488 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.65□□□□□ -1.51
Tnfsf4P43488 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.65□□□□□ -1.51
Tnfsf4P43488 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
Tnfsf4P43488 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Tnfsf4P43488 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Tnfsf4P43488 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Tnfsf4P43488 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Tnfsf4P43488 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Tnfsf4P43488 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Tnfsf4P43488 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.64□□□□□ -1.51
Tnfsf4P43488 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.64□□□□□ -1.51
Tnfsf4P43488 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.64□□□□□ -1.51
Tnfsf4P43488 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.64□□□□□ -1.51
Tnfsf4P43488 Gm13176-201ENSMUST00000117910 477 ntBASIC5.64□□□□□ -1.51
Tnfsf4P43488 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.64□□□□□ -1.51
Tnfsf4P43488 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.64□□□□□ -1.51
Tnfsf4P43488 Gm25782-201ENSMUST00000122526 289 ntBASIC5.64□□□□□ -1.51
Tnfsf4P43488 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Tnfsf4P43488 Gm14747-201ENSMUST00000149888 984 ntBASIC5.64□□□□□ -1.51
Tnfsf4P43488 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms