Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sdc1P18828 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.83□□□□□ -1.64
Sdc1P18828 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Sdc1P18828 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm42819-201ENSMUST00000199630 5121 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm13870-201ENSMUST00000117214 1023 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm12131-201ENSMUST00000117479 359 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm14173-201ENSMUST00000117690 278 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm11889-201ENSMUST00000118402 1079 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm6877-201ENSMUST00000119347 1101 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm14831-201ENSMUST00000120253 409 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm23082-201ENSMUST00000157852 133 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm16184-201ENSMUST00000162324 573 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sdc1P18828 Mirt2-201ENSMUST00000175179 285 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm20690-202ENSMUST00000195126 355 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm18427-201ENSMUST00000195422 515 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sdc1P18828 Ass-ps1-201ENSMUST00000197717 761 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm9497-201ENSMUST00000199908 538 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm8930-201ENSMUST00000201693 768 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC4.82□□□□□ -1.64
Sdc1P18828 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm45789-201ENSMUST00000213038 364 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 AC135353.1-201ENSMUST00000215330 630 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sdc1P18828 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm6575-201ENSMUST00000222946 697 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sdc1P18828 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sdc1P18828 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm15732-201ENSMUST00000079794 480 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sdc1P18828 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Sdc1P18828 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm37553-201ENSMUST00000194135 1602 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.82□□□□□ -1.64
Sdc1P18828 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sdc1P18828 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sdc1P18828 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC4.82□□□□□ -1.64
Sdc1P18828 Gm10062-201ENSMUST00000072180 1470 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm8177-201ENSMUST00000181591 1336 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 n-R5s9-201ENSMUST00000104432 117 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC4.81□□□□□ -1.64
Sdc1P18828 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC4.81□□□□□ -1.64
Sdc1P18828 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm12344-201ENSMUST00000117087 329 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm14539-201ENSMUST00000117527 174 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm13811-201ENSMUST00000117800 256 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 Gm13493-201ENSMUST00000120318 493 ntBASIC4.81□□□□□ -1.64
Sdc1P18828 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC4.81□□□□□ -1.64
Sdc1P18828 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms