Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Slc9a8-203ENSMUST00000109218 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Cd300e-201ENSMUST00000062787 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Mat1a-201ENSMUST00000047286 3208 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Aasdh-202ENSMUST00000120963 3694 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Gm20744-201ENSMUST00000208972 2626 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Gm43196-201ENSMUST00000201762 2114 ntBASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Gm15663-201ENSMUST00000145794 3200 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx1-1G3UXB3 Creb5-201ENSMUST00000047450 2330 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm12080-201ENSMUST00000119821 1883 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm35808-201ENSMUST00000204769 2602 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Asb3-201ENSMUST00000020551 3228 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Snx31-201ENSMUST00000013755 2696 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Cnbd2-203ENSMUST00000109580 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm13046-201ENSMUST00000117391 501 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm16407-201ENSMUST00000122134 567 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm17138-201ENSMUST00000165702 459 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm17965-201ENSMUST00000193904 517 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm43710-201ENSMUST00000199583 452 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 AC154307.1-201ENSMUST00000214799 90 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 CT572985.2-201ENSMUST00000220496 211 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm2710-201ENSMUST00000073196 603 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm26176-201ENSMUST00000083795 105 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Stx12-201ENSMUST00000030698 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm21379-201ENSMUST00000179772 1955 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx1-1G3UXB3 Zfp740-203ENSMUST00000119800 3882 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm10696-201ENSMUST00000161475 2247 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm10696-202ENSMUST00000167916 2205 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 C6-201ENSMUST00000022788 2447 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gucd1-202ENSMUST00000118936 2843 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm43648-201ENSMUST00000197775 2485 ntBASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Lypd6b-201ENSMUST00000028103 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Spata17-205ENSMUST00000183819 1552 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm14895-201ENSMUST00000121858 1361 ntBASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm14904-201ENSMUST00000117067 335 ntBASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm14826-201ENSMUST00000121284 901 ntBASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm23829-201ENSMUST00000157392 270 ntBASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm26037-201ENSMUST00000158150 311 ntBASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Traj54-201ENSMUST00000165071 54 ntBASIC9.56□□□□□ -0.88
Nkx1-1G3UXB3 Gm26179-201ENSMUST00000177723 132 ntBASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms