Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm14116-201ENSMUST00000117733 805 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm11445-201ENSMUST00000119101 532 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm11107-201ENSMUST00000165414 505 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm44319-201ENSMUST00000196974 93 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm43906-201ENSMUST00000203194 906 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm45343-201ENSMUST00000210452 828 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm45448-201ENSMUST00000211739 209 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm5229-201ENSMUST00000039375 354 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lsm1Q8VC85 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm23768-201ENSMUST00000104440 131 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm22714-201ENSMUST00000116894 78 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm2199-201ENSMUST00000119065 874 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm14863-201ENSMUST00000119648 307 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm11370-201ENSMUST00000120583 260 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm11990-201ENSMUST00000121505 897 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm12396-201ENSMUST00000121600 306 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm25904-201ENSMUST00000158491 143 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm24081-201ENSMUST00000175177 125 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm4845-201ENSMUST00000179202 562 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm8009-201ENSMUST00000191672 436 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm42464-202ENSMUST00000198111 774 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm4870-201ENSMUST00000198525 1251 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm44108-201ENSMUST00000203525 422 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm29781-201ENSMUST00000203862 478 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Lsm1Q8VC85 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms