Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdkn2bP55271 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdkn2bP55271 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdkn2bP55271 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdkn2bP55271 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdkn2bP55271 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdkn2bP55271 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdkn2bP55271 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdkn2bP55271 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdkn2bP55271 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdkn2bP55271 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm15765-201ENSMUST00000118407 910 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm14863-201ENSMUST00000119648 307 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm23027-201ENSMUST00000158771 158 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm28941-201ENSMUST00000185536 1017 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm4856-201ENSMUST00000192696 1091 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm4870-201ENSMUST00000198525 1251 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.61□□□□□ -1.51
Cdkn2bP55271 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdkn2bP55271 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdkn2bP55271 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm11256-201ENSMUST00000118109 829 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm15332-201ENSMUST00000118386 357 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm11447-201ENSMUST00000118983 858 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm14732-201ENSMUST00000121372 545 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm23762-201ENSMUST00000158348 106 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm26970-201ENSMUST00000182990 964 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm44494-201ENSMUST00000196760 129 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Gm8523-201ENSMUST00000211386 552 ntBASIC5.6□□□□□ -1.51
Cdkn2bP55271 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdkn2bP55271 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms