Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.56□□□□□ -1.36
NcanP55066 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.56□□□□□ -1.36
NcanP55066 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.56□□□□□ -1.36
NcanP55066 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NcanP55066 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
NcanP55066 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
NcanP55066 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.55□□□□□ -1.36
NcanP55066 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.55□□□□□ -1.36
NcanP55066 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Gm18359-201ENSMUST00000173024 1459 ntBASIC6.55□□□□□ -1.36
NcanP55066 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Gm24469-201ENSMUST00000104487 131 ntBASIC6.55□□□□□ -1.36
NcanP55066 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.55□□□□□ -1.36
NcanP55066 Gm11622-201ENSMUST00000120525 691 ntBASIC6.55□□□□□ -1.36
NcanP55066 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.55□□□□□ -1.36
NcanP55066 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.55□□□□□ -1.36
NcanP55066 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.55□□□□□ -1.36
NcanP55066 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.55□□□□□ -1.36
NcanP55066 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.55□□□□□ -1.36
NcanP55066 Gm23537-201ENSMUST00000157536 330 ntBASIC6.55□□□□□ -1.36
NcanP55066 Gm8358-201ENSMUST00000167222 555 ntBASIC6.55□□□□□ -1.36
NcanP55066 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Gm27004-201ENSMUST00000183300 727 ntBASIC6.55□□□□□ -1.36
NcanP55066 Gm18969-201ENSMUST00000189423 730 ntBASIC6.55□□□□□ -1.36
NcanP55066 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.55□□□□□ -1.36
NcanP55066 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.55□□□□□ -1.36
NcanP55066 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.55□□□□□ -1.36
NcanP55066 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.55□□□□□ -1.36
NcanP55066 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.55□□□□□ -1.36
NcanP55066 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.55□□□□□ -1.36
NcanP55066 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
NcanP55066 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NcanP55066 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.55□□□□□ -1.36
NcanP55066 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NcanP55066 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
NcanP55066 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NcanP55066 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.54□□□□□ -1.36
NcanP55066 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.54□□□□□ -1.36
NcanP55066 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.54□□□□□ -1.36
NcanP55066 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
NcanP55066 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
NcanP55066 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
NcanP55066 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
NcanP55066 Gm22657-201ENSMUST00000104197 132 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm14106-201ENSMUST00000119382 438 ntBASIC6.54□□□□□ -1.36
NcanP55066 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.54□□□□□ -1.36
NcanP55066 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.54□□□□□ -1.36
NcanP55066 Gm12399-201ENSMUST00000121475 446 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.54□□□□□ -1.36
NcanP55066 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.54□□□□□ -1.36
NcanP55066 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Gm22867-201ENSMUST00000157499 109 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm26310-201ENSMUST00000157766 117 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm25655-201ENSMUST00000158465 290 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm16571-201ENSMUST00000159112 291 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm18343-201ENSMUST00000172802 604 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Mir7062-201ENSMUST00000185038 66 ntBASIC6.54□□□□□ -1.36
NcanP55066 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.54□□□□□ -1.36
NcanP55066 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.54□□□□□ -1.36
NcanP55066 Gm17984-201ENSMUST00000205286 859 ntBASIC6.54□□□□□ -1.36
NcanP55066 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
NcanP55066 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NcanP55066 Gm9788-201ENSMUST00000057038 906 ntBASIC6.54□□□□□ -1.36
NcanP55066 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
NcanP55066 Gm23737-201ENSMUST00000082547 159 ntBASIC6.54□□□□□ -1.36
NcanP55066 Gm22300-201ENSMUST00000082661 126 ntBASIC6.54□□□□□ -1.36
NcanP55066 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
NcanP55066 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.54□□□□□ -1.36
NcanP55066 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms