Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm11908-201ENSMUST00000117755 347 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm14871-201ENSMUST00000119056 194 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm12808-201ENSMUST00000120597 404 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm15044-201ENSMUST00000120703 598 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm23806-201ENSMUST00000175157 109 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm18689-201ENSMUST00000203969 902 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.04□□□□□ -1.28
Col1a1P11087 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm24029-201ENSMUST00000083928 143 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col1a1P11087 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
Col1a1P11087 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Col1a1P11087 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm43611-201ENSMUST00000196656 4352 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 AC159635.1-201ENSMUST00000220905 2102 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col1a1P11087 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Col1a1P11087 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm37082-201ENSMUST00000192629 1927 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm7927-201ENSMUST00000118818 880 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm12115-201ENSMUST00000119969 447 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm9006-201ENSMUST00000165520 841 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC7.04□□□□□ -1.28
Col1a1P11087 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm28507-201ENSMUST00000189737 703 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm43712-201ENSMUST00000198020 291 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Mir6994-201ENSMUST00000198985 73 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm43794-201ENSMUST00000200971 692 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm17992-201ENSMUST00000207346 1072 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Gm18850-201ENSMUST00000211578 388 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC7.04□□□□□ -1.28
Col1a1P11087 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col1a1P11087 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col1a1P11087 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col1a1P11087 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm7108-201ENSMUST00000118038 3407 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Col1a1P11087 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC7.03□□□□□ -1.28
Col1a1P11087 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col1a1P11087 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col1a1P11087 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col1a1P11087 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm15766-201ENSMUST00000118025 813 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Gm8595-201ENSMUST00000118250 630 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Gm15660-201ENSMUST00000118997 478 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC7.03□□□□□ -1.28
Col1a1P11087 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm18407-201ENSMUST00000192126 790 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC7.03□□□□□ -1.28
Col1a1P11087 Gm2011-203ENSMUST00000203750 435 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Gm7042-201ENSMUST00000223027 384 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 AC154755.1-201ENSMUST00000225244 537 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Gm8412-201ENSMUST00000077493 440 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col1a1P11087 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col1a1P11087 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.03□□□□□ -1.28
Col1a1P11087 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.28
Col1a1P11087 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Col1a1P11087 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms