Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Mir7685-201ENSMUST00000183555 62 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Mir6903-201ENSMUST00000183597 88 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm9332-201ENSMUST00000198431 730 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm7825-201ENSMUST00000204046 416 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm42874-201ENSMUST00000198888 1774 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm11990-201ENSMUST00000121505 897 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm25489-201ENSMUST00000158727 141 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm3307-201ENSMUST00000176164 632 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm43779-201ENSMUST00000196691 829 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm43436-201ENSMUST00000199308 147 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm19174-201ENSMUST00000216944 956 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Gm8412-201ENSMUST00000077493 440 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 AC154841.1-201ENSMUST00000227263 1479 ntBASIC10.98□□□□□ -0.65
Ccdc180J3QNE4 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Gm42600-201ENSMUST00000202081 3588 ntBASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Gm6427-201ENSMUST00000118721 979 ntBASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Gm14871-201ENSMUST00000119056 194 ntBASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Gm11804-201ENSMUST00000121663 468 ntBASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC10.97□□□□□ -0.65
Ccdc180J3QNE4 Gm43099-201ENSMUST00000198943 5241 ntBASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Gm8604-201ENSMUST00000183150 965 ntBASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Gm4587-201ENSMUST00000209135 637 ntBASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC10.96□□□□□ -0.65
Ccdc180J3QNE4 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ccdc180J3QNE4 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Ccdc180J3QNE4 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm28507-201ENSMUST00000189737 703 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Trbv9-201ENSMUST00000194494 290 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 AC110381.1-201ENSMUST00000218987 586 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm44022-201ENSMUST00000203708 5429 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm43503-201ENSMUST00000200033 3408 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm11774-201ENSMUST00000118601 293 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm12026-201ENSMUST00000120961 1024 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm37838-201ENSMUST00000194464 312 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm42522-201ENSMUST00000196071 255 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm8920-201ENSMUST00000196153 924 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms