Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm23139-201ENSMUST00000179454 132 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm9274-201ENSMUST00000182505 984 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm27019-201ENSMUST00000183056 404 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm27659-201ENSMUST00000183472 98 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Mir378d-201ENSMUST00000184232 110 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Mir6972-201ENSMUST00000184774 64 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm28871-201ENSMUST00000186191 687 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm20561-201ENSMUST00000188131 292 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm28211-201ENSMUST00000190920 315 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm38149-201ENSMUST00000191943 339 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm36448-201ENSMUST00000199916 438 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm43659-201ENSMUST00000200894 628 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm42883-201ENSMUST00000202594 222 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm44135-201ENSMUST00000205221 368 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm19217-201ENSMUST00000218238 328 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm18955-201ENSMUST00000223173 649 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gnrh1-202ENSMUST00000223929 428 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 AC154727.1-201ENSMUST00000226537 499 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm25582-201ENSMUST00000083412 110 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm25614-201ENSMUST00000104013 133 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 n-R5s9-201ENSMUST00000104432 117 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm13196-201ENSMUST00000118297 379 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm11371-201ENSMUST00000120294 385 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm13080-201ENSMUST00000120556 420 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm12881-201ENSMUST00000121191 203 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm12317-201ENSMUST00000122307 319 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm25052-201ENSMUST00000122661 158 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm24286-201ENSMUST00000157632 128 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm24130-201ENSMUST00000158536 151 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm21241-201ENSMUST00000179551 934 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm29141-201ENSMUST00000190357 882 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms