Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Gm15039-201ENSMUST00000118914 875 ntBASIC18.31■□□□□ 0.52
Speer3W4VSP1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Gm38205-201ENSMUST00000192243 258 ntBASIC18.31■□□□□ 0.52
Speer3W4VSP1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Speer3W4VSP1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.3■□□□□ 0.52
Speer3W4VSP1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Speer3W4VSP1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Speer3W4VSP1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.29■□□□□ 0.52
Speer3W4VSP1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.29■□□□□ 0.52
Speer3W4VSP1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Reep4-203ENSMUST00000226563 1444 ntBASIC18.29■□□□□ 0.52
Speer3W4VSP1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Speer3W4VSP1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Speer3W4VSP1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Gm5874-201ENSMUST00000096101 508 ntBASIC18.28■□□□□ 0.52
Speer3W4VSP1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Speer3W4VSP1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Speer3W4VSP1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Speer3W4VSP1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Speer3W4VSP1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Speer3W4VSP1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Speer3W4VSP1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
Speer3W4VSP1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Speer3W4VSP1 Gm18671-201ENSMUST00000214826 683 ntBASIC18.27■□□□□ 0.52
Speer3W4VSP1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Speer3W4VSP1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Speer3W4VSP1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Speer3W4VSP1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Speer3W4VSP1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Speer3W4VSP1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Speer3W4VSP1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.26■□□□□ 0.51
Speer3W4VSP1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Speer3W4VSP1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Speer3W4VSP1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Speer3W4VSP1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.26■□□□□ 0.51
Speer3W4VSP1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Speer3W4VSP1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Speer3W4VSP1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Speer3W4VSP1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.26■□□□□ 0.51
Speer3W4VSP1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Speer3W4VSP1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Speer3W4VSP1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Speer3W4VSP1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Speer3W4VSP1 Gm13234-201ENSMUST00000120010 747 ntBASIC18.25■□□□□ 0.51
Speer3W4VSP1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Speer3W4VSP1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.25■□□□□ 0.51
Speer3W4VSP1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Speer3W4VSP1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.25■□□□□ 0.51
Speer3W4VSP1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.25■□□□□ 0.51
Speer3W4VSP1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms