Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PdfS4R2K0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PdfS4R2K0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.8□□□□□ -0.2
PdfS4R2K0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.8□□□□□ -0.2
PdfS4R2K0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.8□□□□□ -0.2
PdfS4R2K0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PdfS4R2K0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
PdfS4R2K0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PdfS4R2K0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.79□□□□□ -0.2
PdfS4R2K0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.79□□□□□ -0.2
PdfS4R2K0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PdfS4R2K0 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.79□□□□□ -0.2
PdfS4R2K0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PdfS4R2K0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.78□□□□□ -0.2
PdfS4R2K0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PdfS4R2K0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PdfS4R2K0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PdfS4R2K0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PdfS4R2K0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PdfS4R2K0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PdfS4R2K0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PdfS4R2K0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PdfS4R2K0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.77□□□□□ -0.21
PdfS4R2K0 Gm43173-201ENSMUST00000202246 593 ntBASIC13.77□□□□□ -0.21
PdfS4R2K0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PdfS4R2K0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.77□□□□□ -0.21
PdfS4R2K0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PdfS4R2K0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PdfS4R2K0 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.76□□□□□ -0.21
PdfS4R2K0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.76□□□□□ -0.21
PdfS4R2K0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
PdfS4R2K0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PdfS4R2K0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PdfS4R2K0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.76□□□□□ -0.21
PdfS4R2K0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PdfS4R2K0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms