Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rfwd2Q9R1A8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd2Q9R1A8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd2Q9R1A8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd2Q9R1A8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd2Q9R1A8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfwd2Q9R1A8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Gm38205-201ENSMUST00000192243 258 ntBASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfwd2Q9R1A8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfwd2Q9R1A8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd2Q9R1A8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd2Q9R1A8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd2Q9R1A8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd2Q9R1A8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd2Q9R1A8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd2Q9R1A8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfwd2Q9R1A8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfwd2Q9R1A8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rfwd2Q9R1A8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfwd2Q9R1A8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfwd2Q9R1A8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfwd2Q9R1A8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfwd2Q9R1A8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfwd2Q9R1A8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfwd2Q9R1A8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfwd2Q9R1A8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfwd2Q9R1A8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rfwd2Q9R1A8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Rfwd2Q9R1A8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.49■□□□□ 0.55
Rfwd2Q9R1A8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms