Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Gm3375-201ENSMUST00000203929 796 ntBASIC15.69■□□□□ 0.1
Nubp1Q9R060 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.69■□□□□ 0.1
Nubp1Q9R060 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nubp1Q9R060 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.68■□□□□ 0.1
Nubp1Q9R060 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Gm20614-201ENSMUST00000177106 632 ntBASIC15.68■□□□□ 0.1
Nubp1Q9R060 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Gm18959-201ENSMUST00000208954 655 ntBASIC15.68■□□□□ 0.1
Nubp1Q9R060 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Gm18025-201ENSMUST00000221733 862 ntBASIC15.68■□□□□ 0.1
Nubp1Q9R060 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.68■□□□□ 0.1
Nubp1Q9R060 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nubp1Q9R060 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Zfp783-201ENSMUST00000095946 670 ntBASIC15.67■□□□□ 0.1
Nubp1Q9R060 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nubp1Q9R060 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Nubp1Q9R060 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Gm15375-201ENSMUST00000119510 849 ntBASIC15.66■□□□□ 0.1
Nubp1Q9R060 Gm12382-201ENSMUST00000122005 922 ntBASIC15.66■□□□□ 0.1
Nubp1Q9R060 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.66■□□□□ 0.1
Nubp1Q9R060 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nubp1Q9R060 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.65■□□□□ 0.1
Nubp1Q9R060 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Gm21156-201ENSMUST00000189693 869 ntBASIC15.65■□□□□ 0.1
Nubp1Q9R060 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nubp1Q9R060 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nubp1Q9R060 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.64■□□□□ 0.09
Nubp1Q9R060 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.64■□□□□ 0.09
Nubp1Q9R060 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nubp1Q9R060 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nubp1Q9R060 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.64■□□□□ 0.09
Nubp1Q9R060 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nubp1Q9R060 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.64■□□□□ 0.09
Nubp1Q9R060 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nubp1Q9R060 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Nubp1Q9R060 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nubp1Q9R060 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms