Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clca3a1Q9QX15 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.96■□□□□ 0.3
Clca3a1Q9QX15 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Clca3a1Q9QX15 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clca3a1Q9QX15 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Gm27405-201ENSMUST00000184201 112 ntBASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clca3a1Q9QX15 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.93■□□□□ 0.3
Clca3a1Q9QX15 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Gm7290-201ENSMUST00000104990 617 ntBASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Gm12918-201ENSMUST00000120234 636 ntBASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Gm15710-201ENSMUST00000121821 636 ntBASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Gm5075-201ENSMUST00000196916 622 ntBASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clca3a1Q9QX15 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clca3a1Q9QX15 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clca3a1Q9QX15 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms