Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn5aQ9JJV9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Scn5aQ9JJV9 Gm2274-201ENSMUST00000184539 609 ntBASIC18.64■□□□□ 0.58
Scn5aQ9JJV9 Gm4974-201ENSMUST00000209974 875 ntBASIC18.64■□□□□ 0.58
Scn5aQ9JJV9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.64■□□□□ 0.58
Scn5aQ9JJV9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Scn5aQ9JJV9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn5aQ9JJV9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.62■□□□□ 0.57
Scn5aQ9JJV9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Gm7284-201ENSMUST00000131667 944 ntBASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn5aQ9JJV9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn5aQ9JJV9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.59■□□□□ 0.57
Scn5aQ9JJV9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms