Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb1Q9JIF7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Copb1Q9JIF7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb1Q9JIF7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb1Q9JIF7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Copb1Q9JIF7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Copb1Q9JIF7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb1Q9JIF7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Copb1Q9JIF7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Copb1Q9JIF7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Copb1Q9JIF7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Gm8969-201ENSMUST00000199694 526 ntBASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Copb1Q9JIF7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Copb1Q9JIF7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Gm7514-201ENSMUST00000209475 934 ntBASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Gm10033-202ENSMUST00000211874 928 ntBASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Copb1Q9JIF7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb1Q9JIF7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb1Q9JIF7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb1Q9JIF7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb1Q9JIF7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb1Q9JIF7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Copb1Q9JIF7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb1Q9JIF7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Copb1Q9JIF7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Copb1Q9JIF7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Copb1Q9JIF7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb1Q9JIF7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Copb1Q9JIF7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb1Q9JIF7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb1Q9JIF7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.63■□□□□ 0.73
Copb1Q9JIF7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Copb1Q9JIF7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.63■□□□□ 0.73
Copb1Q9JIF7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Copb1Q9JIF7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms