Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.02■□□□□ 0.47
Vps35Q9EQH3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps35Q9EQH3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Vps35Q9EQH3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18■□□□□ 0.47
Vps35Q9EQH3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18■□□□□ 0.47
Vps35Q9EQH3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18■□□□□ 0.47
Vps35Q9EQH3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18■□□□□ 0.47
Vps35Q9EQH3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Vps35Q9EQH3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps35Q9EQH3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Vps35Q9EQH3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Vps35Q9EQH3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps35Q9EQH3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Gm20049-201ENSMUST00000219950 730 ntBASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps35Q9EQH3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms