Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mmp1bQ9EPL6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Mmp1bQ9EPL6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Mmp1bQ9EPL6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Mmp1bQ9EPL6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Mmp1bQ9EPL6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Tgds-204ENSMUST00000228543 1594 ntBASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp1bQ9EPL6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp1bQ9EPL6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp1bQ9EPL6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms