Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.49■□□□□ 0.23
Hmg20aQ9DC33 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hmg20aQ9DC33 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmg20aQ9DC33 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmg20aQ9DC33 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmg20aQ9DC33 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmg20aQ9DC33 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmg20aQ9DC33 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmg20aQ9DC33 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmg20aQ9DC33 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Hmg20aQ9DC33 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Hmg20aQ9DC33 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Hmg20aQ9DC33 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hmg20aQ9DC33 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hmg20aQ9DC33 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Gm9959-201ENSMUST00000068277 390 ntBASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmg20aQ9DC33 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmg20aQ9DC33 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms