Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccdc89Q9DA73 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc89Q9DA73 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc89Q9DA73 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc89Q9DA73 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc89Q9DA73 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Gm7290-201ENSMUST00000104990 617 ntBASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Gm12918-201ENSMUST00000120234 636 ntBASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Gm15710-201ENSMUST00000121821 636 ntBASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Gm5075-201ENSMUST00000196916 622 ntBASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Gm7291-201ENSMUST00000199147 382 ntBASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc89Q9DA73 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc89Q9DA73 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc89Q9DA73 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc89Q9DA73 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc89Q9DA73 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc89Q9DA73 Gm6211-202ENSMUST00000167849 925 ntBASIC19.66■□□□□ 0.74
Ccdc89Q9DA73 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc89Q9DA73 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms