Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
Lonrf3Q9D4H7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.84■□□□□ 0.93
Lonrf3Q9D4H7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Lonrf3Q9D4H7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lonrf3Q9D4H7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lonrf3Q9D4H7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Lonrf3Q9D4H7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Gm15378-201ENSMUST00000121894 207 ntBASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lonrf3Q9D4H7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lonrf3Q9D4H7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lonrf3Q9D4H7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Lonrf3Q9D4H7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lonrf3Q9D4H7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lonrf3Q9D4H7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.81■□□□□ 0.92
Lonrf3Q9D4H7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Lonrf3Q9D4H7 Gm42545-201ENSMUST00000202755 922 ntBASIC20.81■□□□□ 0.92
Lonrf3Q9D4H7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lonrf3Q9D4H7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lonrf3Q9D4H7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Lonrf3Q9D4H7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Gm10138-203ENSMUST00000206952 366 ntBASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lonrf3Q9D4H7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Lonrf3Q9D4H7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lonrf3Q9D4H7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lonrf3Q9D4H7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lonrf3Q9D4H7 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.78■□□□□ 0.92
Lonrf3Q9D4H7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lonrf3Q9D4H7 Gm15375-201ENSMUST00000119510 849 ntBASIC20.78■□□□□ 0.92
Lonrf3Q9D4H7 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.78■□□□□ 0.92
Lonrf3Q9D4H7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lonrf3Q9D4H7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lonrf3Q9D4H7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lonrf3Q9D4H7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Lonrf3Q9D4H7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.77■□□□□ 0.92
Lonrf3Q9D4H7 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.77■□□□□ 0.92
Lonrf3Q9D4H7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Lonrf3Q9D4H7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lonrf3Q9D4H7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lonrf3Q9D4H7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.77■□□□□ 0.92
Lonrf3Q9D4H7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lonrf3Q9D4H7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lonrf3Q9D4H7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lonrf3Q9D4H7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lonrf3Q9D4H7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.76■□□□□ 0.91
Lonrf3Q9D4H7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lonrf3Q9D4H7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.76■□□□□ 0.91
Lonrf3Q9D4H7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lonrf3Q9D4H7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.76■□□□□ 0.91
Lonrf3Q9D4H7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.76■□□□□ 0.91
Lonrf3Q9D4H7 Gm43183-201ENSMUST00000200632 547 ntBASIC20.76■□□□□ 0.91
Lonrf3Q9D4H7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lonrf3Q9D4H7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lonrf3Q9D4H7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms