Protein–RNA interactions for Protein: Q9CY62

Rnf181, E3 ubiquitin-protein ligase RNF181, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf181Q9CY62 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf181Q9CY62 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf181Q9CY62 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf181Q9CY62 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf181Q9CY62 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf181Q9CY62 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf181Q9CY62 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf181Q9CY62 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf181Q9CY62 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf181Q9CY62 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf181Q9CY62 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.32■□□□□ 0.84
Rnf181Q9CY62 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf181Q9CY62 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.32■□□□□ 0.84
Rnf181Q9CY62 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf181Q9CY62 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Gm11950-201ENSMUST00000121615 838 ntBASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Gm27357-201ENSMUST00000183754 135 ntBASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf181Q9CY62 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.31■□□□□ 0.84
Rnf181Q9CY62 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf181Q9CY62 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Gm7213-201ENSMUST00000215977 950 ntBASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf181Q9CY62 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Gm11355-201ENSMUST00000121120 306 ntBASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf181Q9CY62 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf181Q9CY62 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf181Q9CY62 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf181Q9CY62 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.27■□□□□ 0.84
Rnf181Q9CY62 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf181Q9CY62 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf181Q9CY62 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rnf181Q9CY62 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf181Q9CY62 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf181Q9CY62 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Rnf181Q9CY62 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf181Q9CY62 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rnf181Q9CY62 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf181Q9CY62 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.25■□□□□ 0.83
Rnf181Q9CY62 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms