Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cldnd1Q9CQX5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Gm28033-201ENSMUST00000184224 96 ntBASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Gm4974-201ENSMUST00000209974 875 ntBASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cldnd1Q9CQX5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cldnd1Q9CQX5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cldnd1Q9CQX5 Gm17807-201ENSMUST00000186869 298 ntBASIC18.46■□□□□ 0.55
Cldnd1Q9CQX5 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.46■□□□□ 0.55
Cldnd1Q9CQX5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cldnd1Q9CQX5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cldnd1Q9CQX5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cldnd1Q9CQX5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cldnd1Q9CQX5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Cldnd1Q9CQX5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.46■□□□□ 0.54
Cldnd1Q9CQX5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Cldnd1Q9CQX5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Gm13474-201ENSMUST00000122466 815 ntBASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Gm27389-201ENSMUST00000183622 195 ntBASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Gm5587-201ENSMUST00000206270 674 ntBASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Gm21559-201ENSMUST00000220638 855 ntBASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Gm8587-201ENSMUST00000076538 843 ntBASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Golph3-202ENSMUST00000226517 2359 ntBASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Cldnd1Q9CQX5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Cldnd1Q9CQX5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.43■□□□□ 0.54
Cldnd1Q9CQX5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.42■□□□□ 0.54
Cldnd1Q9CQX5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Gm29518-201ENSMUST00000190858 372 ntBASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldnd1Q9CQX5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms