Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
2210010C04RikQ9CPN9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.59■□□□□ 0.09
2210010C04RikQ9CPN9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
2210010C04RikQ9CPN9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
2210010C04RikQ9CPN9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
2210010C04RikQ9CPN9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
2210010C04RikQ9CPN9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
2210010C04RikQ9CPN9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
2210010C04RikQ9CPN9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
2210010C04RikQ9CPN9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
2210010C04RikQ9CPN9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
2210010C04RikQ9CPN9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
2210010C04RikQ9CPN9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
2210010C04RikQ9CPN9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
2210010C04RikQ9CPN9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
2210010C04RikQ9CPN9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
2210010C04RikQ9CPN9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
2210010C04RikQ9CPN9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
2210010C04RikQ9CPN9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms