Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.76■□□□□ 0.11
Scrt1Q99M85 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Gm11927-201ENSMUST00000118472 759 ntBASIC15.76■□□□□ 0.11
Scrt1Q99M85 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.76■□□□□ 0.11
Scrt1Q99M85 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.76■□□□□ 0.11
Scrt1Q99M85 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scrt1Q99M85 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Gm30025-201ENSMUST00000218555 728 ntBASIC15.75■□□□□ 0.11
Scrt1Q99M85 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scrt1Q99M85 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Scrt1Q99M85 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.74■□□□□ 0.11
Scrt1Q99M85 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scrt1Q99M85 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scrt1Q99M85 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.74■□□□□ 0.11
Scrt1Q99M85 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scrt1Q99M85 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scrt1Q99M85 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scrt1Q99M85 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scrt1Q99M85 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scrt1Q99M85 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.73■□□□□ 0.11
Scrt1Q99M85 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Mtag2-201ENSMUST00000058665 714 ntBASIC15.73■□□□□ 0.11
Scrt1Q99M85 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scrt1Q99M85 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.72■□□□□ 0.11
Scrt1Q99M85 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.72■□□□□ 0.11
Scrt1Q99M85 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scrt1Q99M85 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scrt1Q99M85 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Scrt1Q99M85 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scrt1Q99M85 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scrt1Q99M85 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scrt1Q99M85 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.7■□□□□ 0.1
Scrt1Q99M85 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scrt1Q99M85 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms