Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab28Q99KL7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.39■□□□□ 0.37
Rab28Q99KL7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab28Q99KL7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.39■□□□□ 0.37
Rab28Q99KL7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab28Q99KL7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab28Q99KL7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab28Q99KL7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab28Q99KL7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rab28Q99KL7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab28Q99KL7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab28Q99KL7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rab28Q99KL7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.38■□□□□ 0.37
Rab28Q99KL7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab28Q99KL7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab28Q99KL7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rab28Q99KL7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rab28Q99KL7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab28Q99KL7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab28Q99KL7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Rab28Q99KL7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.38■□□□□ 0.37
Rab28Q99KL7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.37■□□□□ 0.37
Rab28Q99KL7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab28Q99KL7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab28Q99KL7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rab28Q99KL7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.36■□□□□ 0.37
Rab28Q99KL7 Gm15375-201ENSMUST00000119510 849 ntBASIC17.36■□□□□ 0.37
Rab28Q99KL7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.36■□□□□ 0.37
Rab28Q99KL7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.36■□□□□ 0.37
Rab28Q99KL7 Mir6349-201ENSMUST00000184059 97 ntBASIC17.36■□□□□ 0.37
Rab28Q99KL7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.36■□□□□ 0.37
Rab28Q99KL7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rab28Q99KL7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab28Q99KL7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab28Q99KL7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab28Q99KL7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab28Q99KL7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab28Q99KL7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.35■□□□□ 0.37
Rab28Q99KL7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.35■□□□□ 0.37
Rab28Q99KL7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.35■□□□□ 0.37
Rab28Q99KL7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab28Q99KL7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.34■□□□□ 0.37
Rab28Q99KL7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.34■□□□□ 0.37
Rab28Q99KL7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.34■□□□□ 0.37
Rab28Q99KL7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab28Q99KL7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab28Q99KL7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rab28Q99KL7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab28Q99KL7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab28Q99KL7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab28Q99KL7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab28Q99KL7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab28Q99KL7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab28Q99KL7 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.33■□□□□ 0.37
Rab28Q99KL7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab28Q99KL7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rab28Q99KL7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rab28Q99KL7 Mir2861-201ENSMUST00000175539 82 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms