Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Gm22325-201ENSMUST00000158904 308 ntBASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdha3Q91Y16 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Gm20049-201ENSMUST00000219950 730 ntBASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdha3Q91Y16 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Pcdha3Q91Y16 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Gm2559-201ENSMUST00000201323 363 ntBASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Tgds-204ENSMUST00000228543 1594 ntBASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha3Q91Y16 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Gm20760-201ENSMUST00000179197 648 ntBASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha3Q91Y16 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdha3Q91Y16 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdha3Q91Y16 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdha3Q91Y16 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdha3Q91Y16 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdha3Q91Y16 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha3Q91Y16 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdha3Q91Y16 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha3Q91Y16 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdha3Q91Y16 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdha3Q91Y16 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms