Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Rarb-207ENSMUST00000225921 2756 ntBASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb1Q91Y08 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Pcdhb1Q91Y08 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb1Q91Y08 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdhb1Q91Y08 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Gm38285-201ENSMUST00000192928 922 ntBASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb1Q91Y08 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb1Q91Y08 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb1Q91Y08 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Flg-201ENSMUST00000050758 1488 ntBASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Gm5408-201ENSMUST00000197998 747 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms